Heh. I originally put this into another thread, but I deleted that thread and transferred it to here -- same mission as Nomad, comments are from my point of view of what happened --
Nomad and I were in a patrol mission in Klingon space. He drafted me in a patrol. I was Fed in a CC+, he was Klingon in a D7C.
We went into the battle. I had two Fed Allies ( either two DD varients or a DD/FF). He had two Lyran allies, one an SR the other I think was a CW class. There was additionally an Orion Pirate (neutral) Frigate that was hostile to both sides.
He took care of the Orion. The Lyrans and I sparred, along with my Fed allies. By mutual consent the idea was to capture a Lyran vessel and then end the battle, or perhaps do something to see if a capture would adversely affect the mission or the DV.
I captured the SR. Nomad then said to self destruct it -- I put it into self destruct sequence but he managed to T-Bomb it before it self destructed.
Now comes the weird part. After the Lyran died (I was in it when it died), it did not default me back to my original ship. In fact, my vessel did not show up on the fleet list at all. The AI took over my vessel and of course controlled the other two Fed vessels and engaged Nomad. I was left to watch the battle, as if my vessel as a player had been destroyed.
The three fed vessels completed the mission. In the debrief screen I got a victory result and over 800 prestige! When I got back to the strategic map, I was once again in my CC+. Nomad said that the DV in the hex went down, signifying that it was a Federation victory -- it was a Klingon hex.
I thought that if you have two vessels in your fleet, and one gets destroyed, then it should automaticaly put you back in your other vessel? Is that right, or is it different with Captured vessels in battle that you control?